Local move is a Monte-Carlo approach to the problem of finding best-fitting lattice models for biopolymers. Through a sequence of local moves, e.g. local backbone modifications, it walks through the conformational space, looking for a configuration as close as possible to the input 3D model, while keeping his points on-lattice. After a user-defined condition is triggered, the experiment stops and the currently best model can be retrieved as a PDB file.
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Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W216-22. doi: 10.1093/nar/gkn367. Epub 2008 Jun 13.
LocalMove: computing on-lattice fits for biopolymers.
Ponty Y, Istrate R, Porcelli E, Clote P.