Oct 272015
 

LmCGST 1.0

:: DESCRIPTION

LmCGST is a bioinformatic pipeline that takes in raw next-generation sequencing reads, calculates a subject HCC profile, compares it to an expandable database, assigns a sequence type, and performs a phylogenetic analysis.

::DEVELOPER

LmCGST team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

The Listeria monocytogenes Core-Genome Sequence Typer (LmCGST): a bioinformatic pipeline for molecular characterization with next-generation sequence data.
Pightling AW, Petronella N, Pagotto F.
BMC Microbiol. 2015 Oct 22;15(1):224. doi: 10.1186/s12866-015-0526-1.

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