May 202014
 

LAMP 2.5 / LAMP-LD 1.1

:: DESCRIPTION

LAMP (Local Ancestry in adMixed Populations) is a software for the inference of locus-specific ancestry in recently admixed populations. LAMP computes the ancestry structure for overlapping windows of contiguous SNPs and combines the results with a majority vote.

LAMP-LD is a software package for the inference of locus-specific ancestry in recently admixed populations.

::DEVELOPER

Computational Genetics Group

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

LAMP / LAMP-LD

:: MORE INFORMATION

Citation:

Sriram Sankararaman, Srinath Sridhar, Gad Kimmel and Eran Halperin,
Estimating Local Ancestry in Admixed Populations,
The American Journal of Human Genetics, Volume 82, Issue 2, 290-303, 2008.

Bioinformatics. 2012 May 15;28(10):1359-67. doi: 10.1093/bioinformatics/bts144. Epub 2012 Apr 11.
Fast and accurate inference of local ancestry in Latino populations.
Baran Y, Pasaniuc B, Sankararaman S, Torgerson DG, Gignoux C, Eng C, Rodriguez-Cintron W, Chapela R, Ford JG, Avila PC, Rodriguez-Santana J, Burchard EG, Halperin E.

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