KnotShape / KnotStructure – Shape and Structure Prediction for ncRNAs including Pseudoknots

KnotShape / KnotStructure

:: DESCRIPTION

KnotShape / KnotStructure was applied to predict shapes and secondary structures on hundreds of ncRNA data sets with and without psuedoknots.

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::DEVELOPER

KnotShape / KnotStructure team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 KnotShape / KnotStructure

:: MORE INFORMATION

Citation:

BMC Bioinformatics. 2013;14 Suppl 2:S1. doi: 10.1186/1471-2105-14-S2-S1. Epub 2013 Jan 21.
Shape and secondary structure prediction for ncRNAs including pseudoknots based on linear SVM.
Achawanantakun R1, Sun Y.