Nov 162015
 

KEGGgraph 1.28.0

:: DESCRIPTION

KEGGGraph is an interface between KEGG pathway and graph object as well as a collection of tools to analyze, dissect and visualize these graphs. It parses the regularly updated KGML (KEGG XML) files into graph models maintaining all essential pathway attributes. The package offers functionalities including parsing, graph operation, visualization and etc.

::DEVELOPER

Jitao David Zhang <jitao_david.zhang at roche.com>, Stefan Wiemann 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux/ MacOsX
  • R
  • BioConductor

:: DOWNLOAD

 KEGGgraph

:: MORE INFORMATION

Citation

Bioinformatics. 2009 Jun 1;25(11):1470-1. doi: 10.1093/bioinformatics/btp167. Epub 2009 Mar 23.
KEGGgraph: a graph approach to KEGG PATHWAY in R and bioconductor.
Zhang JD, Wiemann S.

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