JPSGCS / rJPSGCS 0.2-7
JPSGCS (Java Programs for Statistical Genetics and Computational Statistics) addresses problems in statistical genetics. They include several programs and packages that may be more generally useful, for instance, programs to draw and manipulate graphs, simulation programs, and programs to estimate graphical models.
rJPSGCS is an R interface to programs for fitting LD models and performing gene drops from JPSGCS
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Front Genet. 2013 Apr 19;4:59. doi: 10.3389/fgene.2013.00059. Print 2013.
Employing MCMC under the PPL framework to analyze sequence data in large pedigrees.
Huang Y, Thomas A, Vieland VJ.