JCell is a Java-based application for reconstructing gene regulatory networks from experimental data. The framework provides several algorithms to identify genetic and metabolic dependencies based on experimental data conjoint with mathematical models to describe and simulate regulatory systems.
the Center for Bioinformatics Tübingen (Zentrum für Bioinformatik Tübingen, ZBIT).
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JCell – a Java based framework for inferring regulatory networks from time series data
C. Spieth, J. Supper, F. Streichert, N. Speer, and A. Zell
Bioinformatics (2006) 22 (16): 2051-2052.