ITALICS 2.28.0 – Normalize of Affymetrix GeneChip Human Mapping 100K and 500K set

ITALICS 2.28.0

:: DESCRIPTION

ITALICS (ITerative and Alternative normaLIzation and Copy number calling for affymetrix Snp arrays) is a normalization method that estimates both biological and non-relevant effects in an alternate, iterative manner, accurately eliminating irrelevant effects.

::DEVELOPER

U900 Institut Curie – INSERM/Mines ParisTech “Bioinformatics and Computational Systems Biology of Cancer

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/ MacOsX
  • R package
  • Bioconductor

:: DOWNLOAD

ITALICS

:: MORE INFORMATION

Citation

Bioinformatics. 2008 Mar 15;24(6):768-74. doi: 10.1093/bioinformatics/btn048.
ITALICS: an algorithm for normalization and DNA copy number calling for Affymetrix SNP arrays.
Rigaill G, Hupé P, Almeida A, La Rosa P, Meyniel JP, Decraene C, Barillot E.