Mar 122012
 

IQSeq 1.0

:: DESCRIPTION

IQSeq is a tool for isoform quantification with RNA-seq data. Given isoform annotation and alignment of RNA-seq reads, it will use an EM algorithm to infer the most probable expression level for each isoform of a gene.

::DEVELOPER

Gerstein Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 IQSeq

:: MORE INFORMATION

Citation:

Jiang Du, Jing Leng, Lukas Habegger, Andrea Sboner, Drew McDermott, Mark Gerstein.
IQSeq: Integrated Isoform Quantification Analysis Based on Next-generation Sequencing
PLoS ONE 7(1): e29175. doi:10.1371/journal.pone.0029175

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