ipPCA v2 – iterative pruning Principal Component Analysis

ipPCA v2

:: DESCRIPTION

ipPCA ( iterative pruning PCA) is a novel population structure analysis algorithm which assigns individuals to subpopulations and infers the total number of subpopulations present.

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::DEVELOPER

Genome Institute, BIOTEC

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux/MacOsX
  • MatLab

:: DOWNLOAD

 ipPCA

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2009 Nov 23;10:382. doi: 10.1186/1471-2105-10-382.
Iterative pruning PCA improves resolution of highly structured populations.
Intarapanich A1, Shaw PJ, Assawamakin A, Wangkumhang P, Ngamphiw C, Chaichoompu K, Piriyapongsa J, Tongsima S.