inGAP is an integrated platform for next-generation sequencing project, the core function of which is to detect SNPs and indels using a Bayesian algorithm.It does not have any read length restriction. It can handle 454 sequencing and/or Illumina Solexa sequencing and/or Sanger sequencing data sets.
- Linux / Windows / Mac OsX
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Bioinformatics. 2010 Jan 1;26(1):127-9. Epub 2009 Oct 30.
inGAP: an integrated next-generation genome analysis pipeline.
Qi J, Zhao F, Buboltz A, Schuster SC.