The IMAAAGINE (IMagine An Amino Acid 3D pattern search enGINE) program allows users to search for hypothetical amino acid 3D arrangement query to be searched against the PDB. Users design their own motif with specific residue types and distances between residues, with a flexible distance tolerance.
The Molecular Function Regulation Lab (M. Firdaus Raih research group)
- Web browser
:: MORE INFORMATION
Nurul Nadzirin, Peter Willett, Peter J. Artymiuk, Mohd Firdaus-Raih. 2013.
IMAAAGINE: a webserver for searching hypothetical 3D amino acid side chain arrangements in the Protein Data Bank.
Nucleic Acids Res. 41 (W1): W432-W440