IgRepertoireConstructor – Construction of Antibody Repertoire and Immunoproteogenomics Analysis

IgRepertoireConstructor

:: DESCRIPTION

IgRepertoireConstructor performs error-correction of immunosequencing reads and uses mass spectra to validate the constructed antibody repertoires.

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::DEVELOPER

Algorithmic Biology Lab at St. Petersburg Academic University of the Russian Academy of Sciences

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

 IgRepertoireConstructor

:: MORE INFORMATION

Citation

IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis.
Safonova Y, Bonissone S, Kurpilyansky E, Starostina E, Lapidus A, Stinson J, DePalatis L, Sandoval W, Lill J, Pevzner PA.
Bioinformatics. 2015 Jun 15;31(12):i53-i61. doi: 10.1093/bioinformatics/btv238.