iFUSE – Structural Variants from Next Generation Sequencing data

iFUSE

:: DESCRIPTION

iFUSE is a web-based fusion gene explorer. Upload your Complete Genomics junctions files, or your FusionMap FusionReport.txt file, and iFUSE will analyze and visualize your fusion gene candidates, and report the resulting sequences on the DNA, RNA and protein levels.

::DEVELOPER

ErasmusMC Bioinformatics Department

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • Apache
  • PHP
  • MySQL
  • SED & AWK

:: DOWNLOAD

 iFUSE

:: MORE INFORMATION

Citation:

iFUSE: integrated fusion gene explorer.
Hiltemann S, McClellan EA, van Nijnatten J, Horsman S, Palli I, Teles Alves I, Hartjes T, Trapman J, van der Spek P, Jenster G, Stubbs A.
Bioinformatics. 2013 Jul 1;29(13):1700-1. doi: 10.1093/bioinformatics/btt252.