Feb 242011
 

ICSF

:: DESCRIPTION

ICSF (Identification of Conserved Structural Features) is a Perl program that identifies conserved structural features at sequentially degenerate locations in transcription factor binding sites. ICSF uses base-pair step parameters obtained from a collection of high-resolution DNA crystal structures to discover structural conservation that exists in the sequentially degenerate areas within a binding site and produce profiles of the structural features along the entire site.

::DEVELOPER

Zlab

:: SCREENSHOTS

Command Line

:: REQUIREMENTS

  • Windows/ Linux / Mac OsX
  • Perl

:: DOWNLOAD

ICSFSupplemental Information

:: MORE INFORMATION

Burden HE, Weng Z.
Identification of conserved structural features at sequentially degenerate locations in transcription factor binding sites.
Genome Inform. 2005;16(1):49-58.

 

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