iCall is an improved genotype-calling algorithm for rare and common variants on the Illumina exome array. The algorithm does not rely on having prior training data and it can asssign genotypes to hybridization data from thousands of individuals simultaneously.
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iCall: a genotype-calling algorithm for rare, low-frequency and common variants on the Illumina exome array.
Zhou J, Tantoso E, Wong LP, Ong RT, Bei JX, Li Y, Liu J, Khor CC, Teo YY.
Bioinformatics. 2014 Mar 12.