HHsearch 2.0.16 – Protein Homology Detection by HMM–HMM Comparison

HHsearch 2.0.16

:: DESCRIPTION

HHsearch is a software suite for detecting remote homologues of proteins and generating highquality alignments for homology modeling and function prediction. HHsearch’s performance is testified by the fact that a fully automated version HHpred2 is ranked second best automatic server in the CASP7 blind structure prediction benchmark (2006) while being about > 50 times faster than the other top 20 servers.

::DEVELOPER

Johannes Söding

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • Perl

:: DOWNLOAD

 HHsearch

:: MORE INFORMATION

Citation

Johannes Söding
Protein homology detection by HMM–HMM comparison
Bioinformatics (2005) 21 (7): 951-960

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