Dec 022015
 

HHCompare

:: DESCRIPTION

HHCompare is a pipeline for HMM-HMM comparison based hierarchial clustering and analysis of potential paralogues in sequence set.

::DEVELOPER

Ranko Gacesa, King’s College London

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

 HHCompare

:: MORE INFORMATION

Citation

Gene duplications are extensive and contribute significantly to the toxic proteome of nematocysts isolated from Acropora digitifera (Cnidaria: Anthozoa: Scleractinia).
Gacesa R, Chung R, Dunn SR, Weston AJ, Jaimes-Becerra A, Marques AC, Morandini AC, Hranueli D, Starcevic A, Ward M, Long PF.
BMC Genomics. 2015 Oct 13;16(1):774. doi: 10.1186/s12864-015-1976-4.

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