Jul 102015
 

HATSEQ / HAT

:: DESCRIPTION

 HATSEQ / HAT increased specificity for analysis of tiling-array data in comparison with alternative methods, and that it accurately detected regions-of-interest in different applications of tiling-arrays.

::DEVELOPER

The Delft Bioinformatics Lab

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Matlab

:: DOWNLOAD

 HATSEQ / HAT

:: MORE INFORMATION

Citation

Adv Appl Bioinform Chem. 2013 Oct 25;6:55-62. doi: 10.2147/AABC.S51271. eCollection 2013.
Hypergeometric analysis of tiling-array and sequence data: detection and interpretation of peaks.
Taskesen E1, Hoogeboezem R, Delwel R, Reinders MJ.

HAT: hypergeometric analysis of tiling-arrays with application to promoter-GeneChip data.
Taskesen E, Beekman R, de Ridder J, Wouters BJ, Peeters JK, Touw IP, Reinders MJ, Delwel R.
BMC Bioinformatics. 2010 May 21;11:275.

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