HAPGEN 2.2.0 – Simulate Case Control Datasets at SNP Markers

HAPGEN 2.2.0

:: DESCRIPTION

HAPGEN simulates case control datasets at SNP markers. The new version can now simulate multiple disease SNPs on a single chromosome, on the assumption that each disease SNP acts independently and are in Hardy-Weinberg equilibrium. We also supply a R package that can simulate interaction between the disease SNPs.

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::DEVELOPER

Zhan SuJonathan Marchini , Peter Donnelly

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • MacOsX /  Linux

:: DOWNLOAD

 HAPGEN

:: MORE INFORMATION

Citation

Chris C. A. Spencer, Zhan Su, Peter Donnelly, Jonathan Marchini (2009)
Designing Genome-Wide Association Studies: Sample Size, Power, Imputation, and the Choice of Genotyping Chip.
PLoS Genet 5(5).

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