Apr 172015
 

GSKernel 1.1

:: DESCRIPTION

GSKernel is a specialized string kernel for small bio-molecules, peptides and pseudo-sequences of binding interfaces. The kernel incorporates physico-chemical properties of amino acids and elegantly generalizes eight kernels, comprised of the Oligo, the Weighted Degree, the Blended Spectrum, and the Radial Basis Function.

::DEVELOPER

Machine Learning Research Group at Laval University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 GSKernel

:: MORE INFORMATION

Citation

Sébastien Giguère, Mario Marchand, François Laviolette, Alexandre Drouin, and Jacques Corbeil.
Learning a peptide-protein binding affinity predictor with kernel ridge regression.”
BMC bioinformatics 14, no. 1 (2013): 82.

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