Apr 082016
 

GprotPRED

:: DESCRIPTION

GprotPRED is an online tool that uses profile Hidden Markov Models (pHMMs) for the four known heterotrimeric Galpha protein families, the Gbeta and the Ggamma subunit in order to classify a set of protein sequences into the appropriate G-protein family.

::DEVELOPER

The Biophysics and Bioinformatics Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

GprotPRED

:: MORE INFORMATION

Citation

Biochim Biophys Acta. 2016 May;1864(5):435-40. doi: 10.1016/j.bbapap.2016.02.005. Epub 2016 Feb 5.
GprotPRED: Annotation of Gα, Gβ and Gγ subunits of G-proteins using profile Hidden Markov Models (pHMMs) and application to proteomes.
Kostiou VD, Theodoropoulou MC, Hamodrakas SJ.

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