Mar 272015
 

GLECLUBS / eGLECLUBS

:: DESCRIPTION

GLECLUBS (Globle Ensemble Clusters of Binding Sites) is an algorithm for predicting cis-regulatory binding sites in prokaryotes

eGLECLUBS is an extended version of GLECLUBS for simultaneously predicting binding sites in a group of closely related prokaryotic genomes

::DEVELOPER

Dr. Su’s lab at the University of North Carolina at Charlotte.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /Windows / MacOsX
  • Perl

:: DOWNLOAD

 GLECLUBS / eGLECLUBS

:: MORE INFORMATION

Citation

Shaoqiang Zhang, Minli Xu, Shan Li, and Zhengchang Su.
Genome-wide de novo prediction of cis-regulatory binding sites in prokaryotes.
Nucleic Acids Research, 2009. doi:10.1093/nar/gkp248.

BMC Bioinformatics. 2010 Jul 23;11:397. doi: 10.1186/1471-2105-11-397.
Simultaneous prediction of transcription factor binding sites in a group of prokaryotic genomes.
Zhang S, Li S, Pham PT, Su Z.

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