Apr 292014
 

Gk-arrays 2.1.0

:: DESCRIPTION

Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).Gk-arrays index k-mers of reads and allow to answer different queries on that read collection.

::DEVELOPER

Gk-arrays team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  •  Linux

:: DOWNLOAD

 Gk-arrays

:: MORE INFORMATION

Citation

Philippe N., Salson M., Lecroq T., Leonard M., Commes T., Rivals E.
Querying large read collections in main memory: a versatile data structure.
BMC Bioinformatics 2011, 12:242.

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