Apr 202016
 

Girafe 1.22.0

:: DESCRIPTION

The R/Bioconductor package girafe facilitates the functional exploration of alignments of sequence reads from next-generation sequencing data to a genome. It allows users to investigate the genomic intervals together with the aligned reads and to work with, visualise and export these intervals.

::DEVELOPER

J. Toedling <joern.toedling at curie.fr>, Wolfgang Huber @ Institut Curie

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/ MacOsX
  • R package
  • Bioconductor

:: DOWNLOAD

  girafe

:: MORE INFORMATION

Citation

Girafe–an R/Bioconductor package for functional exploration of aligned next-generation sequencing reads.
Toedling J, Ciaudo C, Voinnet O, Heard E, Barillot E.
Bioinformatics. 2010 Nov 15;26(22):2902-3. doi: 10.1093/bioinformatics/btq531

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