Sep 022013
 

GimmeMotifs 0.65

:: DESCRIPTION

GimmeMotifs is a de novo motif prediction pipeline, especially suited for ChIP-seq datasets. It incorporates several existing motif prediction algorithms in an ensemble method to predict motifs and clusters these motifs using the WIC similarity scoring metric.

::DEVELOPER

Veenstra Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 GimmeMotifs

:: MORE INFORMATION

Citation

Bioinformatics. 2011 Jan 15;27(2):270-1. doi: 10.1093/bioinformatics/btq636. Epub 2010 Nov 15.
GimmeMotifs: a de novo motif prediction pipeline for ChIP-sequencing experiments.
van Heeringen SJ, Veenstra GJ.

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