Mar 302013
 

Gimli 1.0.2

:: DESCRIPTION

Gimli is an open source, high-performance and multi-corpus solution for automatic recognition of biomedical names. It uses Conditional Random Fields (CRFs) with a rich set of features, applying a method to combine different CRF models. Gimli achieves an F-measure of 87,54 on GENETAG and 73,05 on JNLPBA corpus, significantly outperforming existing open and closed source solutions.

::DEVELOPER

UA.PT Bioinformatics

:: SCREENSHOTS

N/A

::REQUIREMENTS

  • Linux/ Windows/MacOsX
  • Java

:: DOWNLOAD

 Gimli

:: MORE INFORMATION

Citation

Gimli: open source and high-performance biomedical name recognition.
Campos D, Matos S, Oliveira JL.
BMC Bioinformatics. 2013 Feb 15;14(1):54.

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