GGEA / EnrichmentBrowser 1.0.0
GGEA is an intuitive method to detect consistently and coherently enriched gene sets, based on prior knowledge derived from directed gene regulatory networks. GGEA comes embedded in the EnrichmentBrowser system, a powerful multi-functional framework for enrichment analysis of gene expression data.
Institute for Bioinformatics, Ludwig-Maximilians-Universität München
- Linux/ MacOsX
- R package
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Bioinformatics. 2011 Jul 1;27(13):i366-73. doi: 10.1093/bioinformatics/btr228.
From sets to graphs: towards a realistic enrichment analysis of transcriptomic systems.
Geistlinger L, Csaba G, Küffner R, Mulder N, Zimmer R.