GenSeed is a Perl program that implements a seed-driven recursive assembly consisting of cycles comprising a similarity search, read selection and assembly. The iterative process results in a progressive extension of the original seed sequence.
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Sobreira, T.J.P. & Gruber, A. (2008).
Sequence-specific reconstruction from fragmentary databases using seed sequences: implementation and validation on SAGE, proteome and generic sequencing data.
Bioinformatics, doi: 10.1093/bioinformatics/btn283