Aug 162012
 

GenoSNP 1.3

:: DESCRIPTION

GenoSNP is a genotyping algorithm for the Illumina Infinium SNP genotyping assay [1]. It is entirely within-sample and does not require the need for a population of control samples nor parameters derived from such a population. The ability to call genotypes using only within-sample information makes the method computationally light and practical for studies involving rare variants and small sample sizes.

::DEVELOPER

Eleni Giannoulatou at eleni@well.ox.ac.uk

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Mac OsX / Windows
  • C Compiler

:: DOWNLOAD

 GenoSNP

:: MORE INFORMATION

Citation

A Variational Bayes within-sample SNP genotyping algorithm that does not require a reference population.
Giannoulatou E, Yau C, Colella S, Ragoussis J, Holmes CC.
Bioinformatics. 2008 Oct 1;24(19):2209-14

 

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