Mar 312011
 

Gecko 2.0

:: DESCRIPTION

Gecko is a further development of the original Gecko software. It allows for the systematic detection of gene cluster conservation in a large number of genomes. The enhancement over the original Gecko tool is the use of set-distance based gene cluster models that allow for the detection of gene clusters with diverse conservation patterns including gaps and missing genes in cluster occurrences. It is also tolerant of errors in gene homology assignment.

::DEVELOPER

Katharina Jahn and Leon Kuchenbecker

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Mac / Windows
  • Java

:: DOWNLOAD

Gecko

:: MORE INFORMATION

Citation

Computation of median gene clusters
S. Böcker, K. Jahn, J. Mixtacki, and J. Stoye. J. Comp. Biol., 16(8):1085-1099, 2009.

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