GASV / GASVPro 20131001
GASV / GASVPro (Geometric Analysis of Structural Variants) is a software for analysis of structural variation from paired-end sequencing and/or array-CGH data. This software has been tested used to find structural variation in both normal and cancer genomes using data from a variety of next-generation sequencing platforms. It can be used to predict structural variants directly from aligned reads in SAM/BAM format.
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S. Sindi, E. Helman, A. Bashir, B.J. Raphael. (2009)
A Geometric Approach for Classification and Comparison of Structural Variants.
Bioinformatics. 25: i222-i230.