fragrep 2 – Efficient Search for Fragmented Patterns in RNA

fragrep 2

:: DESCRIPTION

fragrep implements an efficient algorithm for detecting nucleotide pattern fragments in genomes that occur in a given order. For each pattern a tolerance can be specified separately.

::DEVELOPER

Bioinformatics Leipzig

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 fragrep

:: MORE INFORMATION

Citation

Axel Mosig, Julian Chen, Peter F. Stadler,
Homology Search with Fragmented Nucleic Acid Sequence Patterns,
Proc. Worksh. Alg. Bioinf. (WABI), 2007.

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