May 172016
 

FragGeneScan 1.30

:: DESCRIPTION

FragGeneScan is an application for finding (fragmented) genes in short reads.The software combines sequencing error models and codon usages in a hidden Markov model to improve the prediction of protein-coding region in short reads.

::DEVELOPER

Yuzhen Ye lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

  FragGeneScan

:: MORE INFORMATION

Citation:

Mina Rho, Haixu Tang, and Yuzhen Ye.
FragGeneScan: Predicting Genes in Short and Error-prone Reads.
Nucl. Acids Res., 2010 doi: 10.1093/nar/gkq747

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