FOLDALIGN 2.5 / FOLDALIGNM 1.0.2 – RNA Structure and Sequence Alignment

FOLDALIGN 2.5 / FOLDALIGNM 1.0.2

:: DESCRIPTION

FOLDALIGN: Pairwise local and global structural alignment of RNA sequences.

FOLDALIGNM: Multiple glo-bal struc-tu-ral a-lign-ment of RNA se-quences

::DEVELOPER

Center for non-coding RNA in Technology and Health (RTH)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 FOLDALIGNFOLDALIGNM

:: MORE INFORMATION

Citation:

Foldalign 2.5: multithreaded implementation for pairwise structural RNA alignment.
Sundfeld D, Havgaard JH, de Melo AC, Gorodkin J.
Bioinformatics. 2015 Dec 24. pii: btv748.

Fast Pairwise Structural RNA Alignments by Pruning of the Dynamical Programming Matrix,
Havgaard JH, Torarinsson E, Gorodkin J. PLOS computational biology. 3:e193, 2007

Multiple structural alignment and clustering of RNA sequences,
Torarinsson E, Havgaard JH, Gorodkin J. Bioinformatics. 23:926-32, 2007