Apr 292014
 

FlowgramFixer beta

:: DESCRIPTION

FlowgramFixer is an improved basecaller for the IonTorrent sequencing platform, which reduces error rates, and generates more uniquely aligned reads and more high quality reads than the default base calling algorithm implemented by IonTorrent in TorrentSuite.

::DEVELOPER

David GolanPaul Medvedev.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows / MacOsX
  • C Compiler

:: DOWNLOAD

 FlowgramFixer

 :: MORE INFORMATION

Citation:

Bioinformatics. 2013 Jul 1;29(13):i344-51. doi: 10.1093/bioinformatics/btt212.
Using state machines to model the Ion Torrent sequencing process and to improve read error rates.
Golan D1, Medvedev P.

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