FindProbe v2 – Design Probes for Microarrays

FindProbe v2

:: DESCRIPTION

FindProbe is a software for research involves designing probes for microarrays. Existing algorithms usually select probes using the criteria of homogeneity, sensitivity, and specificity. This project proposes to include one additional criterion, uniformity, which further improves the quality of the probes selected. It makes use of some smart filtering techniques to avoid redundant computation while maintaining accuracy.

::DEVELOPER

Dr. Sung Wing Kin, Ken

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • C Compiler

:: DOWNLOAD

 FindProbe

:: MORE INFORMATION

Citation:

Proc IEEE Comput Soc Bioinform Conf. 2003;2:65-74.
Fast and accurate probe selection algorithm for large genomes.
Sung WK, Lee WH.

Leave a Reply

Your email address will not be published. Required fields are marked *

 

This site uses Akismet to reduce spam. Learn how your comment data is processed.