FFPopSim (Fast Forward Population Genetic Simulation) is a collection of C++ classes and a Python interface for efficient simulation of large populations, in particular when the product of mutation rate and population size is larger than one. It consists of one library for individual-based simulations, and a complementary one for simulation of the entire genotype distribution.
- Linux/ MacOsX
- C++ Compiler
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Bioinformatics. 2012 Dec 15;28(24):3332-3. doi: 10.1093/bioinformatics/bts633. Epub 2012 Oct 24.
FFPopSim: an efficient forward simulation package for the evolution of large populations.
Zanini F, Neher RA.