Apr 202016
 

FastPop

:: DESCRIPTION

FastPop is an efficient R package that fills the gap between Structure and Eigenstrat. It can: 1, generate PCA scores that identify ancestral origins and can be used for multiple studies; 2, infer ancestry information for data arising from two or more intercontinental origins.

::DEVELOPER

FastPop team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R

:: DOWNLOAD

 FastPop

:: MORE INFORMATION

Citation

FastPop: a rapid principal component derived method to infer intercontinental ancestry using genetic data.
Li Y, Byun J, Cai G, Xiao X, Han Y, Cornelis O, Dinulos JE, Dennis J, Easton D, Gorlov I, Seldin MF, Amos CI.
BMC Bioinformatics. 2016 Mar 9;17(1):122. doi: 10.1186/s12859-016-0965-1.

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