Aug 242013
 

ExomeCNV 1.4

:: DESCRIPTION

ExomeCNV, a statistical method to detect CNV and LOH using depth-of-coverage and B-allele frequencies, from mapped short sequence reads.

::DEVELOPER

Nelsonlab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R package
  • Perl
  • Python
  • Samtool
  • GATK

:: DOWNLOAD

 ExomeCNV

:: MORE INFORMATION

Citation

Bioinformatics. 2011 Oct 1;27(19):2648-54. doi: 10.1093/bioinformatics/btr462. Epub 2011 Aug 9.
Exome sequencing-based copy-number variation and loss of heterozygosity detection: ExomeCNV.
Sathirapongsasuti JF, Lee H, Horst BA, Brunner G, Cochran AJ, Binder S, Quackenbush J, Nelson SF.

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