Dec 052011
 

Erpin 5.5.4

:: DESCRIPTION

ERPIN (Easy RNA Profile IdentificatioN) takes as input an RNA sequence alignment and secondary structure annotation and will identify a wide variety of known RNA motifs (such as tRNAs, 5S rRNAs, SRP RNA, C/D box snoRNAs, hammerhead motifs, miRNAs and others) in your sequence(s) of interest. Also contains tool for drawing secondary structure of motifs.

::DEVELOPER

Daniel GAUTHERET and André Lambert

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 Erpin

:: MORE INFORMATION

Citation

Gautheret D, Lambert A. (2001)
Direct RNA Motif Definition and Identification from Multiple Sequence Alignments using Secondary Structure Profiles.
J Mol Biol. 313:1003-11

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