May 282014
 

EPIGWAS 201212

:: DESCRIPTION

EPIGWAS is a suit of scripts that allow users to test:

(1) Chromatin marks for their phenotypic cell type specificity
(2) Specific cell-types for overlap of selected chromatin marks (e.g. those identified by (1) ), with SNPs associated to particular pehnotypes.

::DEVELOPER

The Raychaudhuri Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ WIndows/MacOsX
  • Python

:: DOWNLOAD

 EPIGWAS

:: MORE INFORMATION

Citation

Chromatin marks identify critical cell types for fine mapping complex trait variants.
Trynka G, Sandor C, Han B, Xu H, Stranger BE, Liu XS, Raychaudhuri S.
Nat Genet. 2013 Feb;45(2):124-30. doi: 10.1038/ng.2504.

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