Apr 132015
 

EPIBLASTER 1.0

:: DESCRIPTION

The purpose of EPIBLASTER is to compute the differences of correlation coefficients between Controls and Cases as a mean to isolate for significant SNPs Interactions using gpuCor function of the gputools package on a CUDA enabled graphic card

::DEVELOPER

Bertram Mueller-Myhsok (bmm@mpipsykl.mpg.de) & Tony Kam-Thong [tony@mpipsykl.mpg.de], Machine Learning and Computational Biology Research Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R package
  • gputools R package
  • CUDA developer driver and Toolkit
  • GENABLE

:: DOWNLOAD

 EPIBLASTER

:: MORE INFORMATION

Citation

Eur J Hum Genet. 2011 Apr;19(4):465-71. doi: 10.1038/ejhg.2010.196.
EPIBLASTER-fast exhaustive two-locus epistasis detection strategy using graphical processing units.
Kam-Thong T, Czamara D, Tsuda K, Borgwardt K, Lewis CM, Erhardt-Lehmann A, Hemmer B, Rieckmann P, Daake M, Weber F, Wolf C, Ziegler A, Pütz B, Holsboer F, Sch?lkopf B, Müller-Myhsok B.

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