Sep 082015
 

EPGA2

:: DESCRIPTION

EPGA is an algorithm which extracts paths from De Bruijn graph for genome assembly.

EPGA2 updates some modules in EPGA which can improve memory efficiency in genome asssembly.

::DEVELOPER

EPGA team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • C++ Compiler

:: DOWNLOAD

 EPGA ,EPGA2

:: MORE INFORMATION

Citation

EPGA2: memory-efficient de novo assembler.
Luo J, Wang J, Li W, Zhang Z, Wu FX, Li M, Pan Y.
Bioinformatics. 2015 Aug 26. pii: btv487

EPGA: de novo assembly using the distributions of reads and insert size.
Luo J, Wang J, Zhang Z, Wu FX, Li M, Pan Y.
Bioinformatics. 2014 Nov 17. pii: btu762

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