Jul 132013
 

EDGE-pro 1.3.1

:: DESCRIPTION

EDGE-pro, Estimated Degree of Gene Expression in PROkaryots is an efficient software system to estimate gene expression levels in prokaryotic genomes from RNA-seq data. EDGE-pro uses Bowtie2 for alignment and then estimates expression directly from the alignment results.

::DEVELOPER

Center for Computational Biology , Johns Hopkins University School of Medicine

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 EDGE-pro

:: MORE INFORMATION

Citation:

T. Magoc, D. Wood, and S.L. Salzberg.
EDGE-pro: Estimated Degree of Gene Expression in Prokaryotic Genomes.
Evolutionary Bioinformatics vol.9, pp.127-136, 2013.

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