Oct 162015
 

EBSeq 1.11.0 / EBSeq-HMM 1.4.0

:: DESCRIPTION

R/EBSeq is an R package for identifying genes and isoforms differentially expressed (DE) across two or more biological conditions in an RNA-seq experiment.

EBSeq-HMM is a Bayesian approach for identifying gene-expression changes in ordered RNA-seq experiments.

::DEVELOPER

Kendziorski Lab

:: SCREENSHOTS

EBSeq

:: REQUIREMENTS

  • Windows / Linux / MacOsX
  • R package
  • BioConductor

:: DOWNLOAD

 R/EBSeq , EBSeq-HMM

:: MORE INFORMATION

Citation

EBSeq-HMM: A Bayesian approach for identifying gene-expression changes in ordered RNA-seq experiments.
Leng N, Li Y, Mcintosh BE, Nguyen BK, Duffin B, Tian S, Thomson JA, Dewey C, Stewart R, Kendziorski C.
Bioinformatics. 2015 Apr 5. pii: btv193.

Leng, N., J.A. Dawson, J.A. Thomson, V. Ruotti, A.I. Rissman, B.M.G. Smits, J.D. Haag, M.N. Gould, R.M. Stewart, and C. Kendziorski.
EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments,
Bioinformatics. 2013 Apr 15;29(8):1035-43.

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