DNAux is a software package that includes a Random Generator Tool to generate a lists of random elements in a text file (such as DNA sequences) and a Sliding Window Sequences Generator to compute a list of partially overlapped sequences from any DNA sequence.
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Pereira F, Soares P, Carneiro J, Pereira L, Richards M, Samuels DC, Amorim A
Evidence for variable selective pressures at a large secondary structure of the human mitochondrial DNA control region
Molecular Biology and Evolution. 2008. 25: 2759–2770