Dizzy is a chemical kinetics stochastic simulation software package written in Java. It provides a model definition environment and an implementation of the Gillespie, Gibson-Bruck, and Tau-Leap stochastic algorithms. Dizzy is capable of importing and exporting the SBML model definition language, as well as displaying models graphically using the Cytoscape software system.
- Windows/ Linux
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Ramsey S, Orrell D, Bolouri H. , “Dizzy: stochastic simulation of large-scale genetic regulatory networks.”
J Bioinform Comput Biol. 2005 Apr;3(2):415-36.