Sep 062012
 

Dishuffle

:: DESCRIPTION

Dishuffle is a web interface to a local implementation of the Altschul-Erikson dinucleotide shuffle algorithm, described in “Significance of nucleotide sequence alignments: A method for random sequence permutation that preserves dinucleotide and codon usage”

:: DEVELOPER

Clote Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / MacOsX
  • Python

:: DOWNLOAD

 Dishuffle

:: MORE INFORMATION

Citation

RNA. 2005 May;11(5):578-91.
Structural RNA has lower folding energy than random RNA of the same dinucleotide frequency.
Clote P, Ferré F, Kranakis E, Krizanc D.

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