Mar 262014
 

decaf+py

:: DESCRIPTION

decaf+py is an alignment-free method that calculates phylogenetic distances using a maximum-likelihood approach for a model of sequence change on patterns that are discovered in unaligned sequences

::DEVELOPER

Michael Höhl (m.hoehl@imb.uq.edu.au)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • Python
  • Teiresias

:: DOWNLOAD

 decaf+py

:: MORE INFORMATION

Citation

Evol Bioinform Online. 2007 Feb 25;2:359-75.
Pattern-based phylogenetic distance estimation and tree reconstruction.
Höhl M, Rigoutsos I, Ragan MA.

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